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OpenEye Scientific Software Inc oeshape toolkit
Oeshape Toolkit, supplied by OpenEye Scientific Software Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/oeshape+toolkit/oeshape+toolkit/pmc11268423-320-11-11
Average 90 stars, based on 1 article reviews
oeshape toolkit - by Bioz Stars, 2026-10
90/100 stars

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Related Articles

other:

Article Title: SCISSORS: a linear-algebraical technique to rapidly approximate chemical similarities.
Article Snippet: ROCS was called from within a Python script using the OpenEye OEShape toolkit, and greater than 97% of the execution time was spent inside the OEBestOverlay.Overlay function (which calculates the optimal overlap).

Article Title: Method for rapidly approximating similarities
Article Snippet: ROCS was called from within a Python script using the OpenEye OEShape toolkit, and greater than 97% of the execution time was spent inside the OEBestOverlay.Overlay function (which calculates the optimal overlap).

Software:

Article Title: The comparison of automated clustering algorithms for resampling representative conformer ensembles with RMSD matrix
Article Snippet: .. Shape-based alignments of the data sets in each conformer ensemble were conducted using OEChem [31] and the OEShape toolkit (OpenEye Scientific Software). ..

Article Title: Understanding the impact of the P-loop conformation on kinase selectivity.
Article Snippet: This work addresses the link between selectivity and an unusual, folded conformation for the P-loop observed initially for MAP4K4 and subsequently for other kinases.. Statistical and computational analyses of our crystal structure database demonstrate that inhibitors that induce the P-loop folded conformation tend to be more selective, especially if they take advantage of this specific conformation by interacting more favorably with a conserved Tyr or Phe residue from the P-loop.



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